STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60131.1COG0632 Holliday junction resolvasome, DNA-binding subunit. (210 aa)    
Predicted Functional Partners:
ruvC
COG0817 Holliday junction resolvasome, endonuclease subunit.
 
 0.999
EAR60132.1
COG2255 Holliday junction resolvasome, helicase subunit.
 
 
 0.999
EAR60128.1
Hypothetical protein.
   
 0.832
EAR60127.1
COG0173 Aspartyl-tRNA synthetase.
     0.814
EAR60130.1
COG2860 Predicted membrane protein.
       0.809
EAR60236.1
Putative S-adenosylmethionine:tRNAribosyltransferase-isomerase; COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase).
 
  
 0.785
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
 
  
 0.721
EAR60356.1
Hypothetical protein.
 
 
   0.703
pheT
phenylalanyl-tRNA synthetase beta subunit; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
   
 0.692
EAR62915.1
COG0497 ATPase involved in DNA repair.
 
  
 0.663
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.