STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60443.1soxH protein-like; COG0491 Zn-dependent hydrolases, including glyoxylases. (320 aa)    
Predicted Functional Partners:
EAR60699.1
Probable sulfite oxidase molybdopterin subunit; COG2041 Sulfite oxidase and related enzymes.
 
 
 0.831
thiI
Thiamin biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
 0.830
EAR61678.1
Rhodanese-like protein; COG0607 Rhodanese-related sulfurtransferase.
 
 0.818
EAR60691.1
Sulfur oxidation protein SoxB; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
 
  
 0.774
EAR59982.1
Lipocalin-related protein and Bos/Can/Equ allergen; COG2391 Predicted transporter component.
 
     0.769
EAR60698.1
Probable sulfite oxidase cytochrome subunit; COG3258 Cytochrome c.
  
     0.761
EAR60696.1
Transmembrane proetin, twin-arginine translocation pathway signal; COG5501 Predicted secreted protein.
 
     0.744
EAR60694.1
Sulfur oxidation protein.
 
     0.720
EAR61792.1
Hypothetical protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
     
 0.717
EAR60693.1
Sulfur oxidation protein SoxA; COG3258 Cytochrome c.
 
     0.714
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.