STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62012.1Chain length regulator (capsular polysaccharide biosynthesis); COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. (491 aa)    
Predicted Functional Partners:
EAR62004.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
 0.977
EAR60070.1
Teichoic acid biosynthesis protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
 0.977
EAR59939.1
Putative polysaccharide export protein, outer membrane; COG1596 Periplasmic protein involved in polysaccharide export.
 
 0.975
EAR59937.1
Sugar transferase, putative; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.962
EAR62011.1
COG0438 Glycosyltransferase.
 
 
 0.953
EAR62010.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
 
  
 0.943
EAR62009.1
Hypothetical protein; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.925
EAR60069.1
Bifunctional protein; COG0836 Mannose-1-phosphate guanylyltransferase.
  
 
 0.882
EAR62014.1
COG0438 Glycosyltransferase.
 
 
 0.874
EAR62017.1
Secreted polysaccharide polymerase; COG3307 Lipid A core - O-antigen ligase and related enzymes.
 
  
 0.846
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.