STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62094.1Probable transporter; COG0477 Permeases of the major facilitator superfamily. (407 aa)    
Predicted Functional Partners:
EAR62950.1
COG0460 Homoserine dehydrogenase.
   
  0.716
EAR61860.1
Nitrite reductase [NAD(P)H] large subunit; COG1251 NAD(P)H-nitrite reductase.
     
 0.697
EAR61801.1
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
   
 
  0.683
EAR60808.1
Chorismate mutase, gamma, beta and epsilon proteobacteria; COG1605 Chorismate mutase.
   
 
 0.537
EAR62095.1
Quinoprotein alcohol dehydrogenase; COG4993 Glucose dehydrogenase.
       0.486
EAR61869.1
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
     
 0.480
EAR62242.1
2-acyl-glycerophospho-ethanolamine acyltransferase; COG0477 Permeases of the major facilitator superfamily.
    
 0.472
EAR61412.1
Glutamate synthase large chain precursor; COG0067 Glutamate synthase domain 1.
      
 0.422
EAR62376.1
Calcium-binding EF-hand protein; COG0457 FOG: TPR repeat.
  
     0.403
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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