STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62162.1Transporter, LysE family protein; COG1280 Putative threonine efflux protein. (211 aa)    
Predicted Functional Partners:
EAR62161.1
Lipoprotein, putative; COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
       0.538
EAR62432.1
Response regulator; COG0784 FOG: CheY-like receiver.
    
   0.455
EAR61653.1
Transporter, LysE family protein; COG1280 Putative threonine efflux protein.
  
     0.427
EAR62163.1
Hypothetical protein.
       0.417
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
Server load: low (18%) [HD]