STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61240.1COG0442 Prolyl-tRNA synthetase. (574 aa)    
Predicted Functional Partners:
EAR61478.1
COG0060 Isoleucyl-tRNA synthetase.
  
 0.996
EAR61426.1
COG0018 Arginyl-tRNA synthetase.
  
 0.990
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 0.986
EAR62999.1
COG0495 Leucyl-tRNA synthetase.
 
 0.971
EAR61569.1
COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
  
 0.965
EAR59696.1
COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
  
 0.959
EAR60339.1
COG1190 Lysyl-tRNA synthetase (class II).
  
 0.959
EAR59864.1
COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
  
 0.955
fliN
Surface presentation of antigens (SPOA) protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
    
   0.889
pheT
phenylalanyl-tRNA synthetase beta subunit; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
 
 0.836
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.