STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60166.1COG0656 Aldo/keto reductases, related to diketogulonate reductase. (318 aa)    
Predicted Functional Partners:
EAR61801.1
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
   
 0.856
EAR61281.1
COG1062 Zn-dependent alcohol dehydrogenases, class III.
   
 0.836
EAR61792.1
Hypothetical protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
   
 
 0.821
EAR61109.1
Oxidoreductase Tas, aldo/keto reductase family protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
0.802
EAR62859.1
Oxidoreductase, aldo/keto reductase family protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
 0.745
EAR60411.1
COG2766 Putative Ser protein kinase.
   
    0.725
EAR60533.1
Probable oxidoreductase WpbB; COG0673 Predicted dehydrogenases and related proteins.
 
 
 0.723
EAR59622.1
Hypothetical protein.
  
 
 0.721
EAR62121.1
COG1454 Alcohol dehydrogenase, class IV.
   
 0.709
EAR59886.1
COG1052 Lactate dehydrogenase and related dehydrogenases.
  
 0.691
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.