STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61537.1LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (243 aa)    
Predicted Functional Partners:
EAR61538.1
Hypothetical protein; COG2049 Allophanate hydrolase subunit 1.
 
 0.999
EAR61539.1
Allophanate hydrolase domain protein/urea amidolyase-like protein; COG1984 Allophanate hydrolase subunit 2.
 
 0.999
EAR61536.1
Hypothetical protein.
    0.954
EAR60962.1
COG0506 Proline dehydrogenase.
   
 
  0.872
EAR62768.1
COG0506 Proline dehydrogenase.
   
 
  0.872
EAR61540.1
Hypothetical protein.
 
    0.720
glnA
COG0174 Glutamine synthetase.
   
 
  0.712
EAR59950.1
COG0174 Glutamine synthetase.
   
 
  0.712
EAR59966.1
COG0174 Glutamine synthetase.
   
 
  0.712
EAR61077.1
Hypothetical protein.
    
 0.703
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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