STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61543.1Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (256 aa)    
Predicted Functional Partners:
EAR61545.1
COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
 
 
 0.911
EAR61544.1
Transcriptional Regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.852
EAR62000.1
COG0642 Signal transduction histidine kinase.
   
 0.761
EAR61560.1
COG0642 Signal transduction histidine kinase.
   
 0.714
aroA
Still frameshift 3-phosphoshikimate 1-pcarboxyvinyltransferase prephenate dehydrogenase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
    
 0.714
EAR60243.1
COG0642 Signal transduction histidine kinase.
   
 0.714
EAR59968.1
COG1309 Transcriptional regulator.
  
 
   0.712
EAR61552.1
COG0642 Signal transduction histidine kinase.
  
  
  0.658
EAR61213.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
   0.652
EAR59947.1
Transcriptional regulator, LuxR family protein; COG2771 DNA-binding HTH domain-containing proteins.
  
 
  0.628
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.