STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61549.1Hypothetical protein; COG4666 TRAP-type uncharacterized transport system, fused permease components. (873 aa)    
Predicted Functional Partners:
EAR61550.1
Immunogenic protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
    0.936
EAR60295.1
Immunogenic protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
    0.879
EAR61553.1
Immunogenic protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
    0.866
EAR59897.1
Immunogenic protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
    0.846
EAR61548.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
    0.786
EAR61551.1
Hypothetical protein.
       0.524
EAR61547.1
Hypothetical protein; COG2902 NAD-specific glutamate dehydrogenase.
       0.454
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.