STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61588.1Hypothetical protein. (443 aa)    
Predicted Functional Partners:
EAR61589.1
COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit.
 
  
 0.978
EAR61869.1
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
 0.911
EAR61370.1
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
   
 
 0.828
EAR62000.1
COG0642 Signal transduction histidine kinase.
   
 0.805
EAR62076.1
Formate dehydrogenase, alpha subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
 0.798
EAR60211.1
Molybdopterin oxidoreductase, alpha subunit, putative; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
 0.798
EAR61545.1
COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
    
 
 0.785
EAR61560.1
COG0642 Signal transduction histidine kinase.
    
 
 0.785
EAR60243.1
COG0642 Signal transduction histidine kinase.
    
 
 0.785
EAR61860.1
Nitrite reductase [NAD(P)H] large subunit; COG1251 NAD(P)H-nitrite reductase.
   
 
 0.752
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.