STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60725.1COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase. (513 aa)    
Predicted Functional Partners:
EAR60722.1
Hypothetical protein.
 
   
 0.911
EAR60721.1
Hypothetical protein; COG2907 Predicted NAD/FAD-binding protein.
 
   
 0.910
EAR60723.1
Hypothetical protein; COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
 
   
 0.882
EAR60717.1
COG0415 Deoxyribodipyrimidine photolyase.
 
   
 0.827
EAR60724.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
 
     0.818
EAR59830.1
Hypothetical protein; COG1090 Predicted nucleoside-diphosphate sugar epimerase.
      0.697
EAR60718.1
Hypothetical protein.
     
 0.693
EAR60705.1
COG3380 Predicted NAD/FAD-dependent oxidoreductase.
 
     0.646
EAR60711.1
COG3011 Uncharacterized protein conserved in bacteria.
 
     0.631
EAR60719.1
COG3806 Anti-sigma factor.
 
   
 0.617
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.