STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrB-2Bifunctional methionine sulfoxide reductase A/B protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (377 aa)    
Predicted Functional Partners:
EAR59684.1
Thioredoxin family protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
 0.999
EAR60544.1
Cytochrome C biogenesis protein CcmG; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
 0.999
EAR61681.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
 
 0.993
EAR62196.1
Protein-disulfide reductase; COG4232 Thiol:disulfide interchange protein.
   
 
 0.993
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.940
EAR63123.1
Putative peroxiredoxin/glutaredoxin family protein; COG0678 Peroxiredoxin.
  
 
 0.899
EAR59643.1
COG0222 Ribosomal protein L7/L12.
   
 
 0.893
EAR60047.1
COG0267 Ribosomal protein L33.
   
 
 0.891
EAR60046.1
COG0227 Ribosomal protein L28.
   
   0.890
EAR62943.1
COG0228 Ribosomal protein S16.
   
   0.890
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.