STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR59991.1Hypothetical protein; COG0641 Arylsulfatase regulator (Fe-S oxidoreductase). (477 aa)    
Predicted Functional Partners:
EAR61609.1
Hypothetical protein.
  
 
 0.900
EAR59987.1
Hypothetical protein; COG1404 Subtilisin-like serine proteases.
 
     0.893
EAR59988.1
ABC transporter, ATP-binding protein, MsbA family protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
     0.879
EAR59986.1
PimS2 protein; COG0644 Dehydrogenases (flavoproteins).
 
     0.875
EAR59990.1
Hypothetical protein.
       0.784
EAR59989.1
Hypothetical protein.
       0.773
EAR59984.1
Hypothetical protein.
 
     0.727
EAR61194.1
Hypothetical protein.
  
     0.672
EAR59992.1
Quinohemoprotein amine dehydrogenase, 60 kDa subunit.
       0.615
EAR59994.1
Serine/threonine kinase with two-component sensor domain; COG0642 Signal transduction histidine kinase.
 
     0.580
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.