STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaJPhenylacetate-CoA oxygenase, PaaJ subunit; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme. (179 aa)    
Predicted Functional Partners:
EAR60009.1
phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.999
EAR60010.1
Phenylacetic acid degradation protein; COG3460 Uncharacterized enzyme of phenylacetate metabolism.
 
 0.999
paaI
Putative phenylacetic acid degradation protein.
 
 0.999
EAR60013.1
phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
 0.999
EAR60004.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.987
paaD
Phenylacetic acid degradation protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
 
 0.983
paaF
phenylacetyl-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
  
 0.978
EAR60014.1
Phenylacetic acid degradation protein; COG1012 NAD-dependent aldehyde dehydrogenases.
 
  
 0.959
EAR59447.1
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:OxidoreductaseFAD-binding region; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
 
 0.903
EAR62402.1
COG3217 Uncharacterized Fe-S protein.
  
 
 0.901
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.