STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62287.1Putative diguanylate cyclase (GGDEF); COG2199 FOG: GGDEF domain. (337 aa)    
Predicted Functional Partners:
EAR61349.1
Two-component transcriptional regulator, LuxR family protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   
  0.899
EAR61545.1
COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
 
 0.871
EAR62000.1
COG0642 Signal transduction histidine kinase.
 
 0.867
EAR59994.1
Serine/threonine kinase with two-component sensor domain; COG0642 Signal transduction histidine kinase.
 
 0.855
EAR62342.1
Serine/threonine kinase with two-component sensor domain; COG3899 Predicted ATPase.
 
0.816
EAR61607.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
 
 0.797
EAR60862.1
Adenylate cyclase 1 protein; COG0840 Methyl-accepting chemotaxis protein.
 
 0.744
EAR61560.1
COG0642 Signal transduction histidine kinase.
 
 0.740
EAR60243.1
COG0642 Signal transduction histidine kinase.
 
 0.740
EAR60175.1
Hypothetical protein; COG2206 HD-GYP domain.
 
 
  0.725
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.