STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62312.1COG1270 Cobalamin biosynthesis protein CobD/CbiB. (319 aa)    
Predicted Functional Partners:
EAR62313.1
COG1492 Cobyric acid synthase.
 
 0.998
EAR62311.1
Cobalamin biosynthesis protein CobC; COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
 
  
 0.996
EAR61082.1
COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase.
 
 
 0.993
EAR62325.1
COG2109 ATP:corrinoid adenosyltransferase.
 
  
 0.984
EAR62321.1
precorrin-8X methylmutase; COG2082 Precorrin isomerase.
 
 
 0.947
EAR62324.1
COG1797 Cobyrinic acid a,c-diamide synthase.
 
 0.937
EAR62317.1
Precorrin-3B C17-methyltransferase region protein; COG1010 Precorrin-3B methylase.
 
  
 0.934
EAR62316.1
COG2875 Precorrin-4 methylase.
 
  
 0.932
EAR62320.1
COG2241 Precorrin-6B methylase 1.
 
  
 0.915
EAR61083.1
COG2038 NaMN:DMB phosphoribosyltransferase.
 
  
 0.882
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.