STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62323.1COG1903 Cobalamin biosynthesis protein CbiD. (387 aa)    
Predicted Functional Partners:
EAR62320.1
COG2241 Precorrin-6B methylase 1.
 
 
 0.999
EAR62322.1
COG2099 Precorrin-6x reductase.
 
 0.999
EAR62318.1
COG2073 Cobalamin biosynthesis protein CbiG.
 
 
 0.997
EAR62321.1
precorrin-8X methylmutase; COG2082 Precorrin isomerase.
  
 0.996
EAR62319.1
Cobalamin biosynthesis precorrin-2 methyltransferase; COG2243 Precorrin-2 methylase.
  
 0.992
EAR62317.1
Precorrin-3B C17-methyltransferase region protein; COG1010 Precorrin-3B methylase.
 
 
 0.983
EAR62316.1
COG2875 Precorrin-4 methylase.
 
 
 0.982
EAR62324.1
COG1797 Cobyrinic acid a,c-diamide synthase.
 
  
 0.973
EAR62313.1
COG1492 Cobyric acid synthase.
 
  
 0.926
EAR62329.1
COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
 
 0.854
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.