STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62347.1COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (221 aa)    
Predicted Functional Partners:
EAR61412.1
Glutamate synthase large chain precursor; COG0067 Glutamate synthase domain 1.
    
  0.840
EAR60014.1
Phenylacetic acid degradation protein; COG1012 NAD-dependent aldehyde dehydrogenases.
    
 0.719
EAR59660.1
COG0105 Nucleoside diphosphate kinase.
 
 
    0.662
EAR61643.1
Oxidoreductase, short-chain dehydrogenase/reductase family protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.571
EAR62346.1
Hypothetical protein.
       0.547
EAR60730.1
Putative oxidoreductase protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.492
EAR61006.1
COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III.
  
 
 0.466
EAR61220.1
COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH).
  
  
 0.461
fabD
COG0331 (acyl-carrier-protein) S-malonyltransferase.
   
 
 0.444
fabG-3
3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
0.441
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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