STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62399.1Putative lipoprotein. (179 aa)    
Predicted Functional Partners:
EAR60274.1
COG3425 3-hydroxy-3-methylglutaryl CoA synthase.
    
   0.882
EAR60275.1
Mevalonate kinase, putative; COG1577 Mevalonate kinase.
    
   0.882
EAR60276.1
GHMP kinase; COG1577 Mevalonate kinase.
    
   0.882
EAR62398.1
Hypothetical protein.
       0.762
EAR62400.1
COG3530 Uncharacterized protein conserved in bacteria.
       0.651
EAR60098.1
Hypothetical protein; COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase.
    
 
 0.631
EAR62056.1
Hypothetical protein.
  
    0.607
EAR62397.1
Hypothetical protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.572
EAR62401.1
Hypothetical protein.
       0.475
glmS
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
    0.473
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.