STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR59605.1Zinc metallopeptidase, M16 family; COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like. (948 aa)    
Predicted Functional Partners:
EAR61792.1
Hypothetical protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 
  0.661
EAR61399.1
Riboflavin biosynthesis protein RibD; COG0117 Pyrimidine deaminase.
    
 
 0.633
EAR60371.1
Alginate biosynthesis negative regulator, serine protease AlgY; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
   
 
 0.621
EAR61076.1
Peptidase S1 and S6, chymotrypsin/Hap; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family.
   
 
 0.621
EAR62541.1
Pyruvate oxidase; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase].
     
 0.535
EAR61453.1
Acetolactate synthase large subunit; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase].
     
 0.535
EAR59604.1
Hypothetical protein; COG2216 High-affinity K+ transport system, ATPase chain B.
       0.532
EAR59603.1
Putative KTN NAD-binding domain involved with K+ transportprecursor; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
       0.509
EAR62936.1
mutT/nudix family protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
  
  0.452
EAR61569.1
COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
  
     0.451
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.