STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdhRTranscriptional regulator of pyruvate dehydrogenase complex; COG2186 Transcriptional regulators. (251 aa)    
Predicted Functional Partners:
EAR62402.1
COG3217 Uncharacterized Fe-S protein.
    
  0.718
EAR59447.1
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:OxidoreductaseFAD-binding region; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
    
  0.715
EAR60013.1
phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
    
  0.715
EAR61446.1
Putative L-lactate dehydrogenase (cytochrome) protein; COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases.
  
 0.709
EAR61129.1
NAD(P)H-flavin reductase; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
    
  0.616
EAR60299.1
Transcriptional regulator, putative; COG1802 Transcriptional regulators.
  
  
 0.584
EAR62533.1
COG3068 Uncharacterized protein conserved in bacteria.
  
     0.506
aceE
Pyruvate dehydrogenase; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
  
 0.506
EAR59949.1
COG1802 Transcriptional regulators.
  
  
 0.443
EAR61763.1
COG0777 Acetyl-CoA carboxylase beta subunit.
  
  
 0.439
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.