STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60080.1COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). (308 aa)    
Predicted Functional Partners:
EAR60079.1
Acylneuraminate cytidylyltransferase:Aminotransferase class-III; COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog.
 
     0.898
EAR60081.1
Polysaccharide biosynthesis protein CapD; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
     0.821
EAR60077.1
COG2089 Sialic acid synthase.
 
     0.810
EAR60076.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.762
EAR60078.1
COG1091 dTDP-4-dehydrorhamnose reductase.
       0.762
EAR60166.1
COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
 0.663
EAR60073.1
CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis.
  
 
 0.656
EAR59695.1
COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
    
   0.632
EAR61838.1
COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
    
   0.632
EAR61792.1
Hypothetical protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
   
 
 0.586
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.