STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60232.1COG0341 Preprotein translocase subunit SecF. (306 aa)    
Predicted Functional Partners:
EAR60233.1
COG0342 Preprotein translocase subunit SecD.
0.999
EAR61509.1
COG0201 Preprotein translocase subunit SecY.
  
 
 0.976
yidC
Inner membrane protein, 60 kDa; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
   
 0.975
EAR59763.1
COG1314 Preprotein translocase subunit SecG.
   
 0.959
EAR59648.1
Translocase; COG0690 Preprotein translocase subunit SecE.
   
 0.956
EAR60234.1
COG1862 Preprotein translocase subunit YajC.
 
 
 0.956
EAR60032.1
COG1952 Preprotein translocase subunit SecB.
  
  
 0.750
EAR62942.1
COG0541 Signal recognition particle GTPase.
  
 
 0.707
EAR62759.1
COG0552 Signal recognition particle GTPase.
    
 0.702
EAR60236.1
Putative S-adenosylmethionine:tRNAribosyltransferase-isomerase; COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase).
     
 0.628
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.