STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panBCOG0413 Ketopantoate hydroxymethyltransferase. (264 aa)    
Predicted Functional Partners:
panC
Pantoate--beta-alanine ligase; COG0414 Panthothenate synthetase.
 
 0.999
EAR61090.1
2-dehydropantoate 2-reductase; COG1893 Ketopantoate reductase.
  
 0.989
EAR61802.1
COG0853 Aspartate 1-decarboxylase.
 
  
 0.973
EAR59868.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.
 
 0.947
EAR62839.1
COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase.
     
 0.931
EAR62828.1
COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
    
 0.916
EAR59867.1
poly(A) polymerase; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase.
  
  
 0.757
EAR59462.1
COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
     0.726
EAR61099.1
COG1654 Biotin operon repressor.
  
  
 0.710
rsmI
Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
 
      0.634
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.