STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61393.1COG1267 Phosphatidylglycerophosphatase A and related proteins. (158 aa)    
Predicted Functional Partners:
EAR59690.1
COG0558 Phosphatidylglycerophosphate synthase.
 
  
 0.974
EAR60933.1
Phospholipase family protein; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
     
 0.915
EAR61397.1
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase.
     
 0.876
EAR61394.1
COG0611 Thiamine monophosphate kinase.
  
  
 0.858
EAR61399.1
Riboflavin biosynthesis protein RibD; COG0117 Pyrimidine deaminase.
     
 0.844
EAR61395.1
NusB protein; COG0781 Transcription termination factor.
     
 0.833
ribH
COG0054 Riboflavin synthase beta-chain.
     
 0.824
EAR61400.1
Hypothetical protein; COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains.
     
 0.765
EAR61398.1
COG0307 Riboflavin synthase alpha chain.
       0.689
EAR62676.1
Phosphatidylglycerophosphatase B, putative; COG0671 Membrane-associated phospholipid phosphatase.
  
 
 0.653
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.