Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR59771.1 | EAR60213.1 | MED92_17655 | MED92_11939 | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). | Putative glutamate synthetase. | 0.506 |
EAR59771.1 | EAR61129.1 | MED92_17655 | MED92_04724 | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). | NAD(P)H-flavin reductase; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | 0.913 |
EAR59771.1 | EAR61411.1 | MED92_17655 | MED92_17933 | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). | COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases. | 0.914 |
EAR59771.1 | EAR61412.1 | MED92_17655 | MED92_17938 | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). | Glutamate synthase large chain precursor; COG0067 Glutamate synthase domain 1. | 0.984 |
EAR59771.1 | EAR61767.1 | MED92_17655 | MED92_04192 | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). | Amidophosphoribosyltransferase; COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase. | 0.985 |
EAR59771.1 | EAR61869.1 | MED92_17655 | MED92_02938 | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). | Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing. | 0.477 |
EAR59771.1 | EAR62539.1 | MED92_17655 | MED92_05458 | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). | COG0069 Glutamate synthase domain 2. | 0.648 |
EAR59771.1 | EAR62922.1 | MED92_17655 | MED92_07381 | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). | Hypothetical protein; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | 0.911 |
EAR60213.1 | EAR59771.1 | MED92_11939 | MED92_17655 | Putative glutamate synthetase. | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). | 0.506 |
EAR60213.1 | EAR61411.1 | MED92_11939 | MED92_17933 | Putative glutamate synthetase. | COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases. | 0.987 |
EAR60213.1 | EAR61412.1 | MED92_11939 | MED92_17938 | Putative glutamate synthetase. | Glutamate synthase large chain precursor; COG0067 Glutamate synthase domain 1. | 0.998 |
EAR60213.1 | EAR62539.1 | MED92_11939 | MED92_05458 | Putative glutamate synthetase. | COG0069 Glutamate synthase domain 2. | 0.923 |
EAR61129.1 | EAR59771.1 | MED92_04724 | MED92_17655 | NAD(P)H-flavin reductase; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). | 0.913 |
EAR61129.1 | EAR61411.1 | MED92_04724 | MED92_17933 | NAD(P)H-flavin reductase; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases. | 0.996 |
EAR61129.1 | EAR61412.1 | MED92_04724 | MED92_17938 | NAD(P)H-flavin reductase; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | Glutamate synthase large chain precursor; COG0067 Glutamate synthase domain 1. | 0.940 |
EAR61129.1 | EAR61767.1 | MED92_04724 | MED92_04192 | NAD(P)H-flavin reductase; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | Amidophosphoribosyltransferase; COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase. | 0.531 |
EAR61129.1 | EAR61869.1 | MED92_04724 | MED92_02938 | NAD(P)H-flavin reductase; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing. | 0.867 |
EAR61129.1 | EAR62402.1 | MED92_04724 | MED92_15233 | NAD(P)H-flavin reductase; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | COG3217 Uncharacterized Fe-S protein. | 0.921 |
EAR61129.1 | EAR62922.1 | MED92_04724 | MED92_07381 | NAD(P)H-flavin reductase; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | Hypothetical protein; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | 0.519 |
EAR61411.1 | EAR59771.1 | MED92_17933 | MED92_17655 | COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases. | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). | 0.914 |
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