STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61411.1COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases. (473 aa)    
Predicted Functional Partners:
EAR61412.1
Glutamate synthase large chain precursor; COG0067 Glutamate synthase domain 1.
 0.999
EAR62539.1
COG0069 Glutamate synthase domain 2.
 0.998
EAR61129.1
NAD(P)H-flavin reductase; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
 0.996
EAR60213.1
Putative glutamate synthetase.
  
 0.987
EAR61869.1
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
   
 0.942
EAR62922.1
Hypothetical protein; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
 0.941
EAR59771.1
COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
  
 
 0.914
EAR62402.1
COG3217 Uncharacterized Fe-S protein.
 
 
 0.908
EAR61767.1
Amidophosphoribosyltransferase; COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase.
    
 0.907
EAR62818.1
Putative aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
 
 0.906
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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