STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsSCOG0185 Ribosomal protein S19. (91 aa)    
Predicted Functional Partners:
EAR59639.1
COG0049 Ribosomal protein S7.
 
 0.999
EAR59640.1
COG0048 Ribosomal protein S12.
 
 0.999
rpsB
COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
 
 0.999
EAR62184.1
COG0361 Translation initiation factor 1 (IF-1).
 
 0.999
EAR59757.1
COG0184 Ribosomal protein S15P/S13E.
  
 0.999
EAR61505.1
COG0522 Ribosomal protein S4 and related proteins.
 
 0.999
EAR61506.1
COG0100 Ribosomal protein S11.
 
 0.999
EAR61507.1
COG0099 Ribosomal protein S13.
 
 0.999
EAR61512.1
Hypothetical protein.
  
 0.999
EAR59464.1
COG0097 Ribosomal protein L6P/L9E.
 
 
 0.999
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.