STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR59477.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
EAR59478.1
COG0089 Ribosomal protein L23.
       0.572
EAR59476.1
COG0090 Ribosomal protein L2.
       0.544
rpsS
COG0185 Ribosomal protein S19.
       0.526
EAR59474.1
COG0091 Ribosomal protein L22.
       0.513
rpsC
COG0092 Ribosomal protein S3.
       0.468
EAR59470.1
COG0186 Ribosomal protein S17.
       0.457
EAR59471.1
COG0255 Ribosomal protein L29.
       0.457
EAR59472.1
COG0197 Ribosomal protein L16/L10E.
       0.457
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.