Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APZ04111.1 | APZ04843.1 | BWI95_03030 | BWI95_07105 | Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. | PTS galactitol transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
| APZ04111.1 | APZ04903.1 | BWI95_03030 | BWI95_07415 | Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.493 |
| APZ04111.1 | rapZ | BWI95_03030 | BWI95_07425 | Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNase adaptor protein RapZ; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily. | 0.690 |
| APZ04843.1 | APZ04111.1 | BWI95_07105 | BWI95_03030 | PTS galactitol transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
| APZ04843.1 | APZ04903.1 | BWI95_07105 | BWI95_07415 | PTS galactitol transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.493 |
| APZ04843.1 | rapZ | BWI95_07105 | BWI95_07425 | PTS galactitol transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNase adaptor protein RapZ; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily. | 0.690 |
| APZ04902.1 | APZ04903.1 | BWI95_07410 | BWI95_07415 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.833 |
| APZ04902.1 | APZ04906.1 | BWI95_07410 | BWI95_07430 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Phosphocarrier protein NPr; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.685 |
| APZ04902.1 | APZ04928.1 | BWI95_07410 | BWI95_07585 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Ribonuclease E/G; Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |
| APZ04902.1 | ptsN | BWI95_07410 | BWI95_07420 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PTS IIA-like nitrogen regulatory protein PtsN; Involved in nitrogen metabolism; protein IIA is phosphorylated by enzyme I(Ntr); Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.948 |
| APZ04902.1 | rapZ | BWI95_07410 | BWI95_07425 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNase adaptor protein RapZ; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily. | 0.617 |
| APZ04902.1 | rne | BWI95_07410 | BWI95_14215 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.640 |
| APZ04903.1 | APZ04111.1 | BWI95_07415 | BWI95_03030 | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.493 |
| APZ04903.1 | APZ04843.1 | BWI95_07415 | BWI95_07105 | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | PTS galactitol transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.493 |
| APZ04903.1 | APZ04902.1 | BWI95_07415 | BWI95_07410 | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.833 |
| APZ04903.1 | APZ04906.1 | BWI95_07415 | BWI95_07430 | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphocarrier protein NPr; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.634 |
| APZ04903.1 | ptsN | BWI95_07415 | BWI95_07420 | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | PTS IIA-like nitrogen regulatory protein PtsN; Involved in nitrogen metabolism; protein IIA is phosphorylated by enzyme I(Ntr); Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.951 |
| APZ04903.1 | rapZ | BWI95_07415 | BWI95_07425 | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNase adaptor protein RapZ; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily. | 0.827 |
| APZ04906.1 | APZ04902.1 | BWI95_07430 | BWI95_07410 | Phosphocarrier protein NPr; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.685 |
| APZ04906.1 | APZ04903.1 | BWI95_07430 | BWI95_07415 | Phosphocarrier protein NPr; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.634 |
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