STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrB-2Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. (511 aa)    
Predicted Functional Partners:
APZ06803.1
HlyD family secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
emrA
Multidrug export protein EmrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.937
mdtN
Multidrug transporter subunit MdtN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.854
APZ06804.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.779
APZ05872.1
Multidrug export protein EmrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.749
APZ06591.1
Multidrug transporter EmrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.740
APZ06801.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
marR
Transcriptional regulator; Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.690
aaeA
Efflux transporter periplasmic adaptor subunit; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.688
APZ04022.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.654
Your Current Organism:
Kosakonia cowanii
NCBI taxonomy Id: 208223
Other names: CCUG 45998 A, CCUG 45998 B, CIP 107300, DSM 18146, Enterobacter cowanii, Enterobacter cowanii Inoue et al. 2001, JCM 10956, K. cowanii, Kosakonia cowanii (Inoue et al. 2001) Brady et al. 2013, LMG 23569, LMG:23569, NIH group 42, strain 888-76, strain KSK 246, strain UM-79
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