STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ07458.1(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)    
Predicted Functional Partners:
APZ07459.1
Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
APZ05455.1
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
APZ05456.1
Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.950
APZ07457.1
CTP--molybdopterin cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.947
BWI95_21355
Carbamate kinase; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.861
APZ05454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.811
APZ05453.1
CTP--molybdopterin cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.768
csdA
Cysteine sulfinate desulfinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.468
sufS
Bifunctional cysteine desulfurase/selenocysteine lyase; Cysteine desulfurases mobilize the sulfur from L-cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L- selenocysteine. Selenocysteine lyase activity is however unsure in vivo.
  
  
 0.468
ssnA
Chlorohydrolase; In Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.444
Your Current Organism:
Kosakonia cowanii
NCBI taxonomy Id: 208223
Other names: CCUG 45998 A, CCUG 45998 B, CIP 107300, DSM 18146, Enterobacter cowanii, Enterobacter cowanii Inoue et al. 2001, JCM 10956, K. cowanii, Kosakonia cowanii (Inoue et al. 2001) Brady et al. 2013, LMG 23569, LMG:23569, NIH group 42, strain 888-76, strain KSK 246, strain UM-79
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.