STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAC42_1705Uncharacterized protein. (1300 aa)    
Predicted Functional Partners:
CAC42_7912
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.706
CAC42_3809
Uncharacterized protein.
   
 0.680
CAC42_5701
Uncharacterized protein.
   
 0.680
CAC42_5870
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
   
 0.680
CAC42_313
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.678
CAC42_5714
Nuclear protein localization protein 4.
    
 0.669
CAC42_3929
Uncharacterized protein.
    
 0.668
CAC42_6208
Uncharacterized protein.
    
  0.668
CAC42_7762
Asparagine synthetase domain-containing protein.
    
 0.603
CAC42_6574
DNA repair protein rad16.
    
 0.587
Your Current Organism:
Sphaceloma murrayae
NCBI taxonomy Id: 2082308
Other names: Elsinoe sp. CQ-2017a, S. murrayae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.