SAG0010 protein (Streptococcus agalactiae) - STRING interaction network

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Score

SAG0010

S4 domain protein; Identified by match to PFAM protein family HMM PF01479. (90 aa)

Predicted Functional Partners:

rplS

0.956

rpmB

0.946

rplQ

0.945

rpmH

0.942

rplN

0.940

rplV

0.939

rplM

0.939

rplT

0.937

rplC

0.936

rplD

0.936

Your Current Organism:

Streptococcus agalactiae

NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SAG0010	rplC	SAG0010	SAG0058	S4 domain protein; Identified by match to PFAM protein family HMM PF01479.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.936
SAG0010	rplD	SAG0010	SAG0059	S4 domain protein; Identified by match to PFAM protein family HMM PF01479.	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.936
SAG0010	rplM	SAG0010	SAG0214	S4 domain protein; Identified by match to PFAM protein family HMM PF01479.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.939
SAG0010	rplN	SAG0010	SAG0068	S4 domain protein; Identified by match to PFAM protein family HMM PF01479.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.940
SAG0010	rplQ	SAG0010	SAG0085	S4 domain protein; Identified by match to PFAM protein family HMM PF01479.	Ribosomal protein L17; Identified by match to PFAM protein family HMM PF01196.	0.945
SAG0010	rplS	SAG0010	SAG0544	S4 domain protein; Identified by match to PFAM protein family HMM PF01479.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.956
SAG0010	rplT	SAG0010	SAG1382	S4 domain protein; Identified by match to PFAM protein family HMM PF01479.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.937
SAG0010	rplV	SAG0010	SAG0063	S4 domain protein; Identified by match to PFAM protein family HMM PF01479.	Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).	0.939
SAG0010	rpmB	SAG0010	SAG0129	S4 domain protein; Identified by match to PFAM protein family HMM PF01479.	Ribosomal protein L28; Identified by match to PFAM protein family HMM PF00830; Belongs to the bacterial ribosomal protein bL28 family.	0.946
SAG0010	rpmH	SAG0010	SAG1793	S4 domain protein; Identified by match to PFAM protein family HMM PF01479.	Ribosomal protein L34; Identified by match to PFAM protein family HMM PF00468; Belongs to the bacterial ribosomal protein bL34 family.	0.942
rplC	SAG0010	SAG0058	SAG0010	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	S4 domain protein; Identified by match to PFAM protein family HMM PF01479.	0.936
rplC	rplD	SAG0058	SAG0059	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.999
rplC	rplM	SAG0058	SAG0214	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplC	rplN	SAG0058	SAG0068	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
rplC	rplQ	SAG0058	SAG0085	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L17; Identified by match to PFAM protein family HMM PF01196.	0.999
rplC	rplS	SAG0058	SAG0544	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.999
rplC	rplT	SAG0058	SAG1382	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.999
rplC	rplV	SAG0058	SAG0063	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).	0.999
rplC	rpmB	SAG0058	SAG0129	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L28; Identified by match to PFAM protein family HMM PF00830; Belongs to the bacterial ribosomal protein bL28 family.	0.999
rplC	rpmH	SAG0058	SAG1793	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L34; Identified by match to PFAM protein family HMM PF00468; Belongs to the bacterial ribosomal protein bL34 family.	0.999