Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SAG0102Conserved hypothetical protein; Identified by Glimmer2; putative. (154 aa)    
Predicted Functional Partners:
SAG0103
Conserved hypothetical protein TIGR01440; Identified by Glimmer2; putative; Belongs to the UPF0340 family.
 
    0.932
ecfA2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 
 0.904
ecfT
Cobalt transport family protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 0.874
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
       0.833
SAG1632
Identified by match to PFAM protein family HMM PF02361.
  
 
 0.824
SAG0101
Phosphomethylpyrimidine kinase, putative; Identified by match to PFAM protein family HMM PF00294.
     
 0.821
ecfA1
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 
 0.818
SAG0838
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.760
SAG0837
ABC transporter, ATP-binding protein; Identified by match to PFAM protein family HMM PF00005.
   
 
 0.616
SAG0099
Transcriptional regulator, GntR family; Identified by match to PFAM protein family HMM PF00392.
       0.603
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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