Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SAG0165Conserved hypothetical protein; Identified by Glimmer2; putative. (151 aa)    
Predicted Functional Partners:
cglB
Competence protein CglB; Identified by match to PFAM protein family HMM PF00482.
  
  
 0.989
cglA
Competence protein CglA; Identified by match to PFAM protein family HMM PF00437.
  
  
 0.955
SAG0166
Conserved domain protein; Similar to OMNI:NTL01SPL0084; identified by sequence similarity; putative.
       0.841
SAG0167
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.668
SAG0469
Type IV prepilin peptidase-related protein; Similar to OMNI:SP1808; identified by sequence similarity; putative.
  
  
 0.644
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.628
SAG0162
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.560
celA
Competence protein CelA; Identified by match to PFAM protein family HMM PF00633.
   
  
 0.503
SAG0336
Helicase, putative; Identified by match to PFAM protein family HMM PF00270.
   
  
 0.480
SAG0169
Transcriptional regulator, Cro/CI family; Identified by match to PFAM protein family HMM PF01381.
       0.475
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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