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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAG0165Conserved hypothetical protein; Identified by Glimmer2; putative. (151 aa)    
Predicted Functional Partners:
cglB
Competence protein CglB; Identified by match to PFAM protein family HMM PF00482.
  
  
 0.949
cglA
Competence protein CglA; Identified by match to PFAM protein family HMM PF00437.
  
  
 0.885
SAG0166
Conserved domain protein; Similar to OMNI:NTL01SPL0084; identified by sequence similarity; putative.
       0.800
SAG0782
DNA internalization-related competence protein ComEC/Rec2; Identified by match to PFAM protein family HMM PF00753.
   
  
 0.647
SAG0167
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.566
SAG0469
Type IV prepilin peptidase-related protein; Similar to OMNI:SP1808; identified by sequence similarity; putative.
  
  
 0.520
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.511
celA
Competence protein CelA; Identified by match to PFAM protein family HMM PF00633.
   
  
 0.463
SAG0336
Helicase, putative; Identified by match to PFAM protein family HMM PF00270.
   
  
 0.434
SAG0162
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.419
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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