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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAG0200Transketolase, C-terminal subunit; Identified by match to PFAM protein family HMM PF02779. (309 aa)    
Predicted Functional Partners:
SAG0199
Transketolase, N-terminal subunit; Identified by match to PFAM protein family HMM PF00456.
 0.999
rpe
Ribulose-phosphate 3-epimerase; Identified by match to PFAM protein family HMM PF00834; Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.918
SAG0192
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
    
  0.895
SAG0790
PTS system, beta-glucosides-specific IIABC components; Identified by match to PFAM protein family HMM PF00358.
    
  0.892
SAG1690
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
    
  0.892
SAG1959
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
    
  0.892
SAG0198
PTS system, IIC component, putative; Similar to OMNI:SP2129; identified by sequence similarity; putative.
 
    0.851
SAG0197
PTS system, IIB component, putative; Similar to OMNI:SP2130; identified by sequence similarity; putative.
 
     0.841
tal
Transaldolase family protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.826
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.812
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.