| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplM | rpsB | SAG0214 | SAG1832 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S2; Identified by match to PFAM protein family HMM PF00318; Belongs to the universal ribosomal protein uS2 family. | 0.996 |
| rplM | rpsC | SAG0214 | SAG0064 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.998 |
| rplM | rpsD | SAG0214 | SAG2137 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.996 |
| rplM | rpsE | SAG0214 | SAG0075 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.996 |
| rplM | rpsG | SAG0214 | SAG1770 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.997 |
| rplM | rpsI | SAG0214 | SAG0215 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S9; Identified by match to PFAM protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | rpsJ | SAG0214 | SAG0057 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.996 |
| rplM | rpsL | SAG0214 | SAG1771 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.996 |
| rplM | rpsO | SAG0214 | SAG0202 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.993 |
| rplM | rpsP | SAG0214 | SAG1358 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S16; Identified by match to PFAM protein family HMM PF00886; Belongs to the bacterial ribosomal protein bS16 family. | 0.995 |
| rpsB | rplM | SAG1832 | SAG0214 | Ribosomal protein S2; Identified by match to PFAM protein family HMM PF00318; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.996 |
| rpsB | rpsC | SAG1832 | SAG0064 | Ribosomal protein S2; Identified by match to PFAM protein family HMM PF00318; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
| rpsB | rpsD | SAG1832 | SAG2137 | Ribosomal protein S2; Identified by match to PFAM protein family HMM PF00318; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
| rpsB | rpsE | SAG1832 | SAG0075 | Ribosomal protein S2; Identified by match to PFAM protein family HMM PF00318; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
| rpsB | rpsG | SAG1832 | SAG1770 | Ribosomal protein S2; Identified by match to PFAM protein family HMM PF00318; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
| rpsB | rpsI | SAG1832 | SAG0215 | Ribosomal protein S2; Identified by match to PFAM protein family HMM PF00318; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S9; Identified by match to PFAM protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rpsB | rpsJ | SAG1832 | SAG0057 | Ribosomal protein S2; Identified by match to PFAM protein family HMM PF00318; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
| rpsB | rpsL | SAG1832 | SAG1771 | Ribosomal protein S2; Identified by match to PFAM protein family HMM PF00318; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.999 |
| rpsB | rpsO | SAG1832 | SAG0202 | Ribosomal protein S2; Identified by match to PFAM protein family HMM PF00318; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.998 |
| rpsB | rpsP | SAG1832 | SAG1358 | Ribosomal protein S2; Identified by match to PFAM protein family HMM PF00318; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S16; Identified by match to PFAM protein family HMM PF00886; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
