Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAG0600Hypothetical protein; Identified by Glimmer2; putative. (109 aa)    
Predicted Functional Partners:
SAG0601
Hypothetical protein; Identified by Glimmer2; putative.
       0.775
SAG0602
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.746
SAG0603
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.746
SAG0604
Prophage LambdaSa1, lysin, putative; Similar to GP:1934766; identified by sequence similarity; putative.
       0.746
SAG0599
Prophage LambdaSa1, minor structural protein, putative; Similar to GP:3540290; identified by sequence similarity; putative.
       0.689
SAG0595
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.679
SAG0597
Prophage LambdaSa1, minor structural protein, putative; Similar to GP:3540285; identified by sequence similarity; putative.
       0.679
SAG0596
Prophage LambdaSa1, pblA protein, internal deletion; Similar to GP:10732857; identified by sequence similarity; putative.
       0.678
SAG0598
Prophage LambdaSa1, N-acetylmuramoyl-L-alanine amidase, family 4; Identified by match to PFAM protein family HMM PF01832.
       0.675
SAG0593
Prophage LambdaSa1, structural protein; Similar to PID:1353554; identified by sequence similarity; putative.
       0.647
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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