Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SAG0716Amino acid ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528. (231 aa)    
Predicted Functional Partners:
SAG0715
Amino acid ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 
 
 
0.999
SAG0717
Amino acid ABC transporter, amino acid-binding protein; Identified by match to PFAM protein family HMM PF00497.
 
 0.999
SAG0718
Amino acid ABC transporter, ATP-binding protein; Identified by match to PFAM protein family HMM PF00005.
 0.999
SAG1431
Amino acid ABC transporter, amino acid-binding protein; Identified by match to PFAM protein family HMM PF00497.
 0.993
SAG0135
Amino acid ABC transporter, ATP-binding protein; Identified by match to PFAM protein family HMM PF00005.
 0.970
SAG0492
Amino acid ABC transporter, ATP-binding protein; Identified by match to PFAM protein family HMM PF00005.
 0.952
SAG1467
Glutamine ABC transporter, ATP-binding protein, GlnQ putative; Identified by match to PFAM protein family HMM PF00005.
 0.945
SAG0292
Amino acid ABC transporter, ATP-binding protein; Identified by match to PFAM protein family HMM PF00005.
 0.937
SAG0949
Amino acid ABC transporter, amino acid-binding protein; Identified by match to PFAM protein family HMM PF00497.
 0.928
SAG0948
Amino acid ABC transporter, ATP-binding protein; Identified by match to PFAM protein family HMM PF00005.
 
 0.909
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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