Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAG0794Permease, GntP family; Identified by match to PFAM protein family HMM PF02447. (418 aa)    
Predicted Functional Partners:
garK
Glycerate kinase 2; Identified by match to PFAM protein family HMM PF02595; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002; Belongs to the glycerate kinase type-1 family.
 
  
 0.939
SAG0792
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.860
SAG1803
Carbohydrate kinase, FGGY family; Identified by match to PFAM protein family HMM PF00370; Belongs to the FGGY kinase family.
  
  
 0.677
SAG1346
PTS system, fructose specific IIABC components; Identified by match to PFAM protein family HMM PF00359.
     
 0.610
SAG0795
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.524
SAG1959
PTS system, IIABC components; Identified by match to PFAM protein family HMM PF00358.
  
   
 0.400
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
Server load: low (38%) [HD]