Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAG0803Identified by match to PFAM protein family HMM PF00083. (383 aa)    
Predicted Functional Partners:
SAG1528
Chorismate binding enzyme; Identified by match to PFAM protein family HMM PF00425.
  
 
 0.659
coiA
Competence protein CoiA; Similar to OMNI:SP0978; identified by sequence similarity; putative.
       0.610
SAG0801
Ribosomal small subunit pseudouridine synthase A, putative; Identified by match to PFAM protein family HMM PF00849; Belongs to the pseudouridine synthase RsuA family.
       0.589
pepB
Oligoendopeptidase B; Has oligopeptidase activity and degrades a variety of small bioactive peptides, including bradykinin, neurotensin, and peptide fragments of substance P and adrenocorticotropin. Also hydrolyzes the synthetic collagen-like substrate N-(3-[2-furyl]acryloyl)-Leu-Gly-Pro- Ala (FALGPA).
       0.579
SAG0800
Identified by match to PFAM protein family HMM PF00043.
       0.413
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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