Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SAG0912Conserved hypothetical protein; Identified by Glimmer2; putative. (367 aa)    
Predicted Functional Partners:
SAG0911
Cation-transporting ATPase, E1-E2 family; Identified by match to PFAM protein family HMM PF00122.
 
    0.810
msrB
Identified by match to PFAM protein family HMM PF01641.
       0.646
SAG0908
HD domain protein; Identified by match to PFAM protein family HMM PF01966.
       0.630
SAG1554
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.583
SAG0909
Acetyltransferase, GNAT family; Identified by match to PFAM protein family HMM PF00583.
       0.529
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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