Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAG0971Protein of unknown function/lipoprotein, putative; Identified by match to PFAM protein family HMM PF03180; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002; Belongs to the nlpA lipoprotein family. (282 aa)    
Predicted Functional Partners:
SAG1638
ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 0.987
SAG0775
ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
 0.985
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.977
SAG0774
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
 0.943
SAG0776
YaeC family protein; Identified by match to PFAM protein family HMM PF03180.
 
  
 
0.758
SAG0970
Acetyltransferase, GNAT family; Identified by match to PFAM protein family HMM PF00583.
       0.490
SAG2048
5-methyltetrahydrofolate--homocysteine methyltransferase, putative; Identified by match to PFAM protein family HMM PF02219.
  
  
 0.458
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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