Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SAG0973Nisin-resistance protein, putative. (320 aa)    
Predicted Functional Partners:
SAG0975
ABC transporter, permease protein, putative; Similar to OMNI:NTL01LL1789; identified by sequence similarity; putative.
 
 
   0.821
SAG0974
ABC transporter, ATP-binding protein; Identified by match to PFAM protein family HMM PF00005.
 
     0.810
SAG0433
Surface protein Rib; Identified by match to PFAM protein family HMM PF00746.
  
 
 0.584
SAG0593
Prophage LambdaSa1, structural protein; Similar to PID:1353554; identified by sequence similarity; putative.
  
 
 0.584
SAG1462
Cell wall surface anchor family protein; Identified by match to PFAM protein family HMM PF00746.
  
 
 0.584
SAG0976
DNA-binding response regulator; Identified by match to PFAM protein family HMM PF00072.
 
     0.573
SAG0926
Identified by match to PFAM protein family HMM PF00877.
    
 
 0.562
SAG1998
Hypothetical protein; Identified by Glimmer2; putative.
    
 
 0.562
SAG2174
Serine protease; Identified by match to PFAM protein family HMM PF00089.
  
 
 0.557
SAG0977
Sensor histidine kinase; Identified by match to PFAM protein family HMM PF00512.
     
 0.555
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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