Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAG1027Conserved hypothetical protein; Identified by Glimmer2; putative. (84 aa)    
Predicted Functional Partners:
SAG1033
Identified by match to PFAM protein family HMM PF01580.
 
    0.762
SAG1035
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.724
SAG1028
Hypothetical protein; Identified by Glimmer2; putative.
       0.718
SAG1039
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.716
SAG1029
Hypothetical protein; Identified by Glimmer2; putative.
       0.698
SAG0230
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.678
SAG1038
Phage infection protein, putative.
 
     0.593
SAG1030
Protein of unknown function; Similar to OMNI:SA0643; identified by sequence similarity; putative; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.
       0.458
SAG1031
Conserved domain protein; Similar to GB:L13925 PID:466482; identified by sequence similarity; putative.
       0.453
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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