Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SAG1107Voltage-gated chloride channel family protein; Identified by match to PFAM protein family HMM PF00654. (510 aa)    
Predicted Functional Partners:
potB
Spermidine/putrescine ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
  
    0.681
potA
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
     
 0.675
potD
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein; Identified by match to PFAM protein family HMM PF01547.
       0.673
potC
Spermidine/putrescine ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF00528.
       0.673
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.653
SAG0541
Voltage-gated chloride channel family protein; Identified by match to PFAM protein family HMM PF00654.
 
     0.468
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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