Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SAG1744Prenyltransferase, UbiA family; Identified by match to PFAM protein family HMM PF01040. (299 aa)    
Predicted Functional Partners:
SAG1743
Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to PFAM protein family HMM PF00070.
 
 
 0.977
SAG1738
Identified by match to PFAM protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
 
  
 0.949
cydC
ABC transporter, ATP-binding protein CydC; Identified by match to PFAM protein family HMM PF00005.
 
   
 0.941
SAG1740
ABC transporter, ATP-binding protein CydD; Identified by match to PFAM protein family HMM PF00005.
 
     0.913
cydB
Cytochrome d ubiquinol oxidase, subunit II; Identified by match to PFAM protein family HMM PF02322.
 
   
 0.897
cydA
Cytochrome d oxidase, subunit I; Identified by match to PFAM protein family HMM PF01654.
 
   
 0.873
SAG1317
3-hydroxy-3-methylglutaryl-CoA reductase; Identified by match to PFAM protein family HMM PF00368; Belongs to the HMG-CoA reductase family.
   
 
 0.713
SAG1081
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.513
SAG1143
Conserved hypothetical protein; Identified by Glimmer2; putative.
    
 0.502
SAG0498
Geranyltranstransferase, putative; Identified by match to PFAM protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
    
 0.477
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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