Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SAG1882Prophage LambdaSa2, repressor protein, putative. (120 aa)    
Predicted Functional Partners:
SAG1883
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.773
SAG1884
Hypothetical protein; Identified by Glimmer2; putative.
       0.608
SAG1880
Hypothetical protein; Identified by Glimmer2; putative.
       0.524
SAG1881
Hypothetical protein; Identified by Glimmer2; putative.
       0.524
SAG1545
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.470
SAG1801
Transcriptional antiterminator, BglG family; Identified by match to PFAM protein family HMM PF00874.
  
    0.440
SAG0622
Hydrolase, haloacid dehalogenase-like family; Identified by match to PFAM protein family HMM PF00702.
 
     0.415
SAG1412
Polysaccharide biosynthesis protein; Identified by match to PFAM protein family HMM PF01943.
 
     0.407
SAG1885
Prophage LambdaSa2, site-specific recombinase, phage integrase family; Identified by match to PFAM protein family HMM PF00589; Belongs to the 'phage' integrase family.
       0.406
lacD
Tagatose 1,6-diphosphate aldolase; Identified by match to TIGR protein family HMM TIGR01232; Belongs to the aldolase LacD family.
    
  0.401
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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