STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAG1903Hypothetical protein; Identified by Glimmer2; putative. (34 aa)    
Predicted Functional Partners:
SAG1904
Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to PFAM protein family HMM PF00106.
       0.566
SAG1901
Glucuronyl hydrolase; Similar to GP:5869507; identified by sequence similarity; putative.
       0.545
SAG1902
PTS system, IIA component.
       0.545
SAG1905
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.535
SAG1906
Carbohydrate kinase, PfkB family; Identified by match to PFAM protein family HMM PF00294.
       0.483
eda-2
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Identified by match to PFAM protein family HMM PF01081.
       0.471
SAG1900
PTS system, IIB component.
       0.438
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.